Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.56■□□□□ 0.24
PHGDHO43175 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.56■□□□□ 0.24
PHGDHO43175 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
PHGDHO43175 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.56■□□□□ 0.24
PHGDHO43175 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.56■□□□□ 0.24
PHGDHO43175 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.56■□□□□ 0.24
PHGDHO43175 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.56■□□□□ 0.24
PHGDHO43175 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
PHGDHO43175 CYP2A7P1-201ENST00000595391 815 ntBASIC16.56■□□□□ 0.24
PHGDHO43175 CLEC4GP1-201ENST00000596555 870 ntBASIC16.56■□□□□ 0.24
PHGDHO43175 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.56■□□□□ 0.24
PHGDHO43175 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.56■□□□□ 0.24
PHGDHO43175 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PHGDHO43175 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PHGDHO43175 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.55■□□□□ 0.24
PHGDHO43175 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PHGDHO43175 NFIC-211ENST00000641145 8399 ntBASIC16.55■□□□□ 0.24
PHGDHO43175 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
PHGDHO43175 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.55■□□□□ 0.24
PHGDHO43175 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PHGDHO43175 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.55■□□□□ 0.24
PHGDHO43175 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.55■□□□□ 0.24
PHGDHO43175 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.55■□□□□ 0.24
PHGDHO43175 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PHGDHO43175 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.55■□□□□ 0.24
PHGDHO43175 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PHGDHO43175 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.55■□□□□ 0.24
PHGDHO43175 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PHGDHO43175 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
PHGDHO43175 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PHGDHO43175 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PHGDHO43175 AC073621.1-201ENST00000392730 636 ntBASIC16.54■□□□□ 0.24
PHGDHO43175 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PHGDHO43175 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.54■□□□□ 0.24
PHGDHO43175 KRT18P27-201ENST00000427733 1299 ntBASIC16.54■□□□□ 0.24
PHGDHO43175 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.54■□□□□ 0.24
PHGDHO43175 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.54■□□□□ 0.24
PHGDHO43175 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.54■□□□□ 0.24
PHGDHO43175 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
PHGDHO43175 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PHGDHO43175 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHGDHO43175 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.54■□□□□ 0.24
PHGDHO43175 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms