Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A1O00337 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A1O00337 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A1O00337 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC28A1O00337 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A1O00337 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SLC28A1O00337 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC28A1O00337 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A1O00337 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC28A1O00337 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
SLC28A1O00337 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A1O00337 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A1O00337 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A1O00337 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 AC073621.1-201ENST00000392730 636 ntBASIC16.01■□□□□ 0.15
SLC28A1O00337 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC28A1O00337 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC28A1O00337 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.01■□□□□ 0.15
SLC28A1O00337 AC073648.2-201ENST00000510116 352 ntBASIC16.01■□□□□ 0.15
SLC28A1O00337 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC28A1O00337 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC28A1O00337 AC008667.4-201ENST00000607370 168 ntBASIC16.01■□□□□ 0.15
SLC28A1O00337 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.01■□□□□ 0.15
SLC28A1O00337 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC28A1O00337 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SLC28A1O00337 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC28A1O00337 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC28A1O00337 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A1O00337 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.01■□□□□ 0.15
SLC28A1O00337 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A1O00337 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC28A1O00337 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC28A1O00337 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16■□□□□ 0.15
SLC28A1O00337 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16■□□□□ 0.15
SLC28A1O00337 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16■□□□□ 0.15
SLC28A1O00337 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16■□□□□ 0.15
SLC28A1O00337 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 RPS2P1-201ENST00000434010 821 ntBASIC16■□□□□ 0.15
SLC28A1O00337 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16■□□□□ 0.15
SLC28A1O00337 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16■□□□□ 0.15
SLC28A1O00337 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16■□□□□ 0.15
SLC28A1O00337 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16■□□□□ 0.15
SLC28A1O00337 AC010654.1-201ENST00000615722 808 ntBASIC16■□□□□ 0.15
SLC28A1O00337 MIR1199-201ENST00000621445 119 ntBASIC16■□□□□ 0.15
SLC28A1O00337 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16■□□□□ 0.15
SLC28A1O00337 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
SLC28A1O00337 AC008894.3-201ENST00000624324 3103 ntBASIC16■□□□□ 0.15
SLC28A1O00337 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
SLC28A1O00337 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC28A1O00337 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC28A1O00337 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SLC28A1O00337 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC28A1O00337 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SLC28A1O00337 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC28A1O00337 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms