Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
NACAE9PAV3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
NACAE9PAV3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NACAE9PAV3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
NACAE9PAV3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NACAE9PAV3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 AC012640.2-201ENST00000561606 901 ntBASIC12.22□□□□□ -0.45
NACAE9PAV3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.22□□□□□ -0.45
NACAE9PAV3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 AC064862.7-201ENST00000604520 867 ntBASIC12.22□□□□□ -0.45
NACAE9PAV3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NACAE9PAV3 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
NACAE9PAV3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 RCN1P2-201ENST00000398357 915 ntBASIC12.22□□□□□ -0.45
NACAE9PAV3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
NACAE9PAV3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 AL590627.1-203ENST00000421194 1026 ntBASIC12.22□□□□□ -0.45
NACAE9PAV3 PMS2P1-201ENST00000431037 1228 ntBASIC12.22□□□□□ -0.45
NACAE9PAV3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.22□□□□□ -0.45
NACAE9PAV3 MOK-208ENST00000519058 917 ntTSL 2 BASIC12.22□□□□□ -0.45
NACAE9PAV3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
NACAE9PAV3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 AL645728.1-201ENST00000366221 2101 ntBASIC12.21□□□□□ -0.45
NACAE9PAV3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
NACAE9PAV3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.21□□□□□ -0.45
NACAE9PAV3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.21□□□□□ -0.45
NACAE9PAV3 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC12.21□□□□□ -0.45
NACAE9PAV3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
NACAE9PAV3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NACAE9PAV3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
NACAE9PAV3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
NACAE9PAV3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.21□□□□□ -0.45
NACAE9PAV3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
NACAE9PAV3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.21□□□□□ -0.45
NACAE9PAV3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.21□□□□□ -0.45
NACAE9PAV3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.21□□□□□ -0.45
NACAE9PAV3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.21□□□□□ -0.45
NACAE9PAV3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.21□□□□□ -0.45
NACAE9PAV3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.21□□□□□ -0.45
NACAE9PAV3 AC021087.4-201ENST00000563761 564 ntBASIC12.21□□□□□ -0.45
NACAE9PAV3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.21□□□□□ -0.45
NACAE9PAV3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.21□□□□□ -0.45
NACAE9PAV3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.21□□□□□ -0.45
NACAE9PAV3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
NACAE9PAV3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
NACAE9PAV3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
NACAE9PAV3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms