Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC24.26■■□□□ 1.47
HFM1A2PYH4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
HFM1A2PYH4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HFM1A2PYH4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
HFM1A2PYH4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 AC241585.1-201ENST00000433527 519 ntBASIC24.25■■□□□ 1.47
HFM1A2PYH4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 AL590560.3-201ENST00000623350 461 ntBASIC24.25■■□□□ 1.47
HFM1A2PYH4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC24.25■■□□□ 1.47
HFM1A2PYH4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
HFM1A2PYH4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 AL136982.4-201ENST00000437689 1740 ntBASIC24.24■■□□□ 1.47
HFM1A2PYH4 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC24.24■■□□□ 1.47
HFM1A2PYH4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
HFM1A2PYH4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
HFM1A2PYH4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HFM1A2PYH4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
HFM1A2PYH4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HFM1A2PYH4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
HFM1A2PYH4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 BASP1P1-201ENST00000430708 665 ntBASIC24.23■■□□□ 1.47
HFM1A2PYH4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 IGHV3-42-201ENST00000520410 361 ntBASIC24.23■■□□□ 1.47
HFM1A2PYH4 AL512361.1-201ENST00000554200 418 ntBASIC24.23■■□□□ 1.47
HFM1A2PYH4 AC010336.2-201ENST00000564226 506 ntBASIC24.23■■□□□ 1.47
HFM1A2PYH4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 CYP4F24P-201ENST00000586049 1580 ntBASIC24.23■■□□□ 1.47
HFM1A2PYH4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 MTHFR-217ENST00000641820 1569 ntBASIC24.23■■□□□ 1.47
HFM1A2PYH4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC24.23■■□□□ 1.47
HFM1A2PYH4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC24.22■■□□□ 1.47
HFM1A2PYH4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC24.22■■□□□ 1.47
HFM1A2PYH4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC24.22■■□□□ 1.47
HFM1A2PYH4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC24.22■■□□□ 1.47
HFM1A2PYH4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC24.22■■□□□ 1.47
HFM1A2PYH4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
HFM1A2PYH4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
HFM1A2PYH4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC24.21■■□□□ 1.47
HFM1A2PYH4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms