Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 AC098831.1-202ENST00000438821 336 ntBASIC18.96■□□□□ 0.63
CLIC4Q9Y696 AC108751.1-201ENST00000490852 363 ntBASIC18.96■□□□□ 0.63
CLIC4Q9Y696 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 AL160237.2-201ENST00000556165 472 ntBASIC18.96■□□□□ 0.63
CLIC4Q9Y696 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 AC116407.3-201ENST00000623905 1129 ntBASIC18.96■□□□□ 0.63
CLIC4Q9Y696 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 AL162727.3-201ENST00000635661 2787 ntBASIC18.96■□□□□ 0.63
CLIC4Q9Y696 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLIC4Q9Y696 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 AL603832.2-201ENST00000566195 2125 ntBASIC18.95■□□□□ 0.62
CLIC4Q9Y696 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLIC4Q9Y696 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 HMGA1P7-201ENST00000406908 502 ntBASIC18.94■□□□□ 0.62
CLIC4Q9Y696 IGLL3P-201ENST00000412472 434 ntBASIC18.94■□□□□ 0.62
CLIC4Q9Y696 CXCL1P1-201ENST00000502804 216 ntBASIC18.94■□□□□ 0.62
CLIC4Q9Y696 UNC93B6-202ENST00000528242 690 ntBASIC18.94■□□□□ 0.62
CLIC4Q9Y696 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 MIR4751-201ENST00000578027 74 ntBASIC18.94■□□□□ 0.62
CLIC4Q9Y696 MIR4515-201ENST00000584082 81 ntBASIC18.94■□□□□ 0.62
CLIC4Q9Y696 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CLIC4Q9Y696 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLIC4Q9Y696 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms