Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 PTCHD3P3-201ENST00000403073 906 ntBASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 OR7E14P-202ENST00000530490 1290 ntBASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 AL805961.1-202ENST00000641562 540 ntBASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 LINC00895-201ENST00000629028 1637 ntBASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
POLR1DQ9Y2S0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 RPS2P1-201ENST00000434010 821 ntBASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 AC087163.2-201ENST00000457299 853 ntBASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 AF228730.7-201ENST00000641842 219 ntBASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
POLR1DQ9Y2S0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 TOP3BP1-201ENST00000420768 1380 ntBASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.88□□□□□ -0.03
POLR1DQ9Y2S0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms