Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 AC074386.1-202ENST00000463561 864 ntBASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 MPDU1-223ENST00000582151 728 ntBASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 SLC22A20-204ENST00000530038 1673 ntBASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 CICP6-201ENST00000457191 2729 ntBASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPH3AQ9Y2J0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 AC131009.4-201ENST00000624048 1740 ntBASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 CYMP-203ENST00000474680 1263 ntBASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 MTDHP5-201ENST00000598980 586 ntBASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 AL078644.1-201ENST00000609881 752 ntBASIC15.27■□□□□ 0.04
RPH3AQ9Y2J0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 AC092919.2-201ENST00000623631 1645 ntBASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
RPH3AQ9Y2J0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 AP002490.2-201ENST00000524791 560 ntBASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 RFPL4AP1-201ENST00000530883 850 ntBASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 MIR4515-201ENST00000584082 81 ntBASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.26■□□□□ 0.03
RPH3AQ9Y2J0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 AC106886.4-201ENST00000623557 2502 ntBASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.25■□□□□ 0.03
RPH3AQ9Y2J0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms