Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SSX2IPQ9Y2D8 AC131009.4-201ENST00000624048 1740 ntBASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 AC108860.2-201ENST00000562760 2183 ntBASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 SPDYE14P-201ENST00000442619 822 ntBASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 MPDU1-223ENST00000582151 728 ntBASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 AC027307.2-201ENST00000591252 911 ntBASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 AL158211.3-201ENST00000607385 239 ntBASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 AC021097.1-201ENST00000607902 574 ntBASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 AC093525.9-201ENST00000624961 1746 ntBASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SSX2IPQ9Y2D8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 MIR346-201ENST00000362234 95 ntBASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 SLC22A20-204ENST00000530038 1673 ntBASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 ALG1L8P-201ENST00000533887 760 ntBASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 AP000842.3-202ENST00000569238 1080 ntBASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.85■□□□□ 0.45
SSX2IPQ9Y2D8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms