Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 AC008550.1-201ENST00000511500 884 ntBASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERGIC3Q9Y282 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 PPT1-215ENST00000641471 2368 ntBASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CYP2D8P-201ENST00000433633 1490 ntBASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 TSPY7P-201ENST00000431358 1114 ntBASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 AC141257.4-201ENST00000634557 245 ntBASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 AC136944.6-201ENST00000634818 245 ntBASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 AL161772.1-201ENST00000610494 4412 ntBASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ERGIC3Q9Y282 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 KRT17P2-201ENST00000300992 1314 ntBASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 KRT8P10-201ENST00000450021 1447 ntBASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 STK19B-204ENST00000512515 211 ntBASIC15.21■□□□□ 0.03
ERGIC3Q9Y282 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms