Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 AC007967.3-201ENST00000434308 558 ntBASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
RPH3ALQ9UNE2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 COX11P1-201ENST00000489116 835 ntBASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 MIR4497-201ENST00000583208 89 ntBASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 AC005332.3-201ENST00000589904 676 ntBASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 AC022188.1-201ENST00000620960 1664 ntBASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
RPH3ALQ9UNE2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.04□□□□□ -0.32
RPH3ALQ9UNE2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPH3ALQ9UNE2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPH3ALQ9UNE2 GPR89P-201ENST00000407924 1495 ntBASIC13.04□□□□□ -0.32
RPH3ALQ9UNE2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPH3ALQ9UNE2 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPH3ALQ9UNE2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPH3ALQ9UNE2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.04□□□□□ -0.32
RPH3ALQ9UNE2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RPH3ALQ9UNE2 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms