Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 AC074386.1-202ENST00000463561 864 ntBASIC14.22□□□□□ -0.13
GCM1Q9NP62 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 MIR4492-201ENST00000581627 80 ntBASIC14.22□□□□□ -0.13
GCM1Q9NP62 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.22□□□□□ -0.13
GCM1Q9NP62 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GCM1Q9NP62 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.22□□□□□ -0.13
GCM1Q9NP62 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 MCCD1P2-201ENST00000423228 335 ntBASIC14.21□□□□□ -0.13
GCM1Q9NP62 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.21□□□□□ -0.13
GCM1Q9NP62 MTDHP5-201ENST00000598980 586 ntBASIC14.21□□□□□ -0.13
GCM1Q9NP62 AC013467.2-201ENST00000605472 835 ntBASIC14.21□□□□□ -0.13
GCM1Q9NP62 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 AC006277.1-201ENST00000624348 1610 ntBASIC14.21□□□□□ -0.13
GCM1Q9NP62 LINC00895-201ENST00000629028 1637 ntBASIC14.21□□□□□ -0.13
GCM1Q9NP62 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GCM1Q9NP62 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
GCM1Q9NP62 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GCM1Q9NP62 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GCM1Q9NP62 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GCM1Q9NP62 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GCM1Q9NP62 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GCM1Q9NP62 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 AL645728.1-201ENST00000366221 2101 ntBASIC14.2□□□□□ -0.14
GCM1Q9NP62 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GCM1Q9NP62 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GCM1Q9NP62 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms