Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 AC093909.1-201ENST00000504731 1122 ntBASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 TP73-AS1-207ENST00000624167 988 ntBASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 AL391005.1-201ENST00000623953 2435 ntBASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NEUROD4Q9HD90 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 AC092364.2-201ENST00000596710 2692 ntBASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 FAM197Y8-203ENST00000450145 560 ntBASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 AL773604.1-201ENST00000617417 272 ntBASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NEUROD4Q9HD90 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.71■□□□□ 0.1
NEUROD4Q9HD90 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NEUROD4Q9HD90 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.71■□□□□ 0.1
NEUROD4Q9HD90 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 GPAA1P2-202ENST00000606848 1787 ntBASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 MIR574-201ENST00000385209 96 ntBASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 MRPL20P1-201ENST00000400819 433 ntBASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 KRT18P58-201ENST00000527480 1120 ntBASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.7■□□□□ 0.1
NEUROD4Q9HD90 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms