Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.21■□□□□ 0.67
BRMS1Q9HCU9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.66
BRMS1Q9HCU9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 AL512652.2-201ENST00000625156 1716 ntBASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 AC023141.13-201ENST00000604991 943 ntBASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRMS1Q9HCU9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 RHOQP3-201ENST00000437982 621 ntBASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 CICP6-201ENST00000457191 2729 ntBASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
BRMS1Q9HCU9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 AC007967.2-201ENST00000432613 625 ntBASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 AL031731.1-201ENST00000642131 2094 ntBASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
BRMS1Q9HCU9 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms