Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SSR1P1-201ENST00000407630 814 ntBASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 KRT19P2-202ENST00000557173 1012 ntBASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 LINC02560-201ENST00000596379 459 ntBASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 AC073592.5-201ENST00000624854 528 ntBASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 AL163051.1-201ENST00000569214 1512 ntBASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SCAF1Q9H7N4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC24.94■■□□□ 1.58
SCAF1Q9H7N4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 AC009154.2-201ENST00000621177 724 ntBASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 AC008761.3-201ENST00000624803 892 ntBASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 AC079328.2-201ENST00000561241 3354 ntBASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 AC099343.3-201ENST00000605834 2503 ntBASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
SCAF1Q9H7N4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 AC055876.3-201ENST00000431496 288 ntBASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 AC087272.1-201ENST00000523624 533 ntBASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 AC022145.2-201ENST00000598203 171 ntBASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 CLIC4P2-201ENST00000601934 717 ntBASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 AC138649.4-201ENST00000612222 287 ntBASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 AC093783.1-201ENST00000612976 329 ntBASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 TCEAL4-213ENST00000613326 1166 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 AC010507.1-201ENST00000633895 436 ntBASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 AC006504.4-201ENST00000592118 1568 ntBASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 AL022393.1-201ENST00000625142 1677 ntBASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
SCAF1Q9H7N4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms