Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RNF41Q9H4P4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 AC004461.1-201ENST00000412461 403 ntBASIC19.54■□□□□ 0.72
RNF41Q9H4P4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 SPCS2P4-201ENST00000436160 681 ntBASIC19.54■□□□□ 0.72
RNF41Q9H4P4 AL592309.1-201ENST00000443127 649 ntBASIC19.54■□□□□ 0.72
RNF41Q9H4P4 DNAJB3-202ENST00000449667 1266 ntBASIC19.54■□□□□ 0.72
RNF41Q9H4P4 PRYP6-201ENST00000514804 343 ntBASIC19.54■□□□□ 0.72
RNF41Q9H4P4 IGHV3-62-201ENST00000520057 340 ntBASIC19.54■□□□□ 0.72
RNF41Q9H4P4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF41Q9H4P4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 CNN2P11-201ENST00000429351 262 ntBASIC19.53■□□□□ 0.72
RNF41Q9H4P4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 AC027307.2-201ENST00000591252 911 ntBASIC19.53■□□□□ 0.72
RNF41Q9H4P4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 AC092171.3-201ENST00000610122 2651 ntBASIC19.53■□□□□ 0.72
RNF41Q9H4P4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF41Q9H4P4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 AC073439.1-201ENST00000624121 1774 ntBASIC19.52■□□□□ 0.72
RNF41Q9H4P4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 AC105233.2-201ENST00000523697 349 ntBASIC19.52■□□□□ 0.72
RNF41Q9H4P4 AF228730.5-201ENST00000530288 346 ntBASIC19.52■□□□□ 0.72
RNF41Q9H4P4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 LINC01225-203ENST00000563550 1244 ntBASIC19.52■□□□□ 0.72
RNF41Q9H4P4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 AC073389.1-201ENST00000595595 795 ntBASIC19.52■□□□□ 0.72
RNF41Q9H4P4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF41Q9H4P4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms