Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS11Q9H270 AC063926.3-201ENST00000624734 5658 ntBASIC16.77■□□□□ 0.28
VPS11Q9H270 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.77■□□□□ 0.28
VPS11Q9H270 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VPS11Q9H270 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
VPS11Q9H270 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VPS11Q9H270 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS11Q9H270 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS11Q9H270 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS11Q9H270 AC013467.2-201ENST00000605472 835 ntBASIC16.77■□□□□ 0.28
VPS11Q9H270 AC092119.3-201ENST00000612618 583 ntBASIC16.77■□□□□ 0.28
VPS11Q9H270 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS11Q9H270 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS11Q9H270 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS11Q9H270 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS11Q9H270 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.77■□□□□ 0.27
VPS11Q9H270 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS11Q9H270 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS11Q9H270 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
VPS11Q9H270 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VPS11Q9H270 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.77■□□□□ 0.27
VPS11Q9H270 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS11Q9H270 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS11Q9H270 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS11Q9H270 AC002310.6-201ENST00000624451 1377 ntBASIC16.77■□□□□ 0.27
VPS11Q9H270 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
VPS11Q9H270 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VPS11Q9H270 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.76■□□□□ 0.27
VPS11Q9H270 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.76■□□□□ 0.27
VPS11Q9H270 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
VPS11Q9H270 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.76■□□□□ 0.27
VPS11Q9H270 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 AC138894.3-201ENST00000603787 634 ntBASIC16.76■□□□□ 0.27
VPS11Q9H270 AC069148.1-201ENST00000608741 768 ntBASIC16.76■□□□□ 0.27
VPS11Q9H270 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 AL590326.2-201ENST00000625139 305 ntBASIC16.76■□□□□ 0.27
VPS11Q9H270 AP000550.4-202ENST00000639755 178 ntBASIC16.76■□□□□ 0.27
VPS11Q9H270 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS11Q9H270 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VPS11Q9H270 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VPS11Q9H270 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VPS11Q9H270 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS11Q9H270 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VPS11Q9H270 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
VPS11Q9H270 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS11Q9H270 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS11Q9H270 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS11Q9H270 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS11Q9H270 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS11Q9H270 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS11Q9H270 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS11Q9H270 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS11Q9H270 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.75■□□□□ 0.27
VPS11Q9H270 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.75■□□□□ 0.27
VPS11Q9H270 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.75■□□□□ 0.27
VPS11Q9H270 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.75■□□□□ 0.27
VPS11Q9H270 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.75■□□□□ 0.27
VPS11Q9H270 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.75■□□□□ 0.27
VPS11Q9H270 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VPS11Q9H270 AC064862.7-201ENST00000604520 867 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms