Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PCGF1Q9BSM1 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PCGF1Q9BSM1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCGF1Q9BSM1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
PCGF1Q9BSM1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PCGF1Q9BSM1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 GPX1P2-201ENST00000429271 606 ntBASIC14□□□□□ -0.17
PCGF1Q9BSM1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 AC087163.2-201ENST00000457299 853 ntBASIC14□□□□□ -0.17
PCGF1Q9BSM1 CXCL1P1-201ENST00000502804 216 ntBASIC14□□□□□ -0.17
PCGF1Q9BSM1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 AC096734.2-201ENST00000562054 433 ntBASIC14□□□□□ -0.17
PCGF1Q9BSM1 OR7E47P-204ENST00000575924 449 ntBASIC14□□□□□ -0.17
PCGF1Q9BSM1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 AC092865.6-201ENST00000642101 219 ntBASIC14□□□□□ -0.17
PCGF1Q9BSM1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 AC106886.4-201ENST00000623557 2502 ntBASIC14□□□□□ -0.17
PCGF1Q9BSM1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14□□□□□ -0.17
PCGF1Q9BSM1 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCGF1Q9BSM1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 RPSAP43-201ENST00000402237 625 ntBASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 PAWRP1-201ENST00000451083 565 ntBASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 AC023141.13-201ENST00000604991 943 ntBASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 AL691403.2-201ENST00000618460 490 ntBASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 AC007064.4-201ENST00000637740 555 ntBASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.99□□□□□ -0.17
PCGF1Q9BSM1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms