Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HDHD3Q9BSH5 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 AL732292.2-201ENST00000609649 430 ntBASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 AL022326.1-202ENST00000641533 845 ntBASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 AC006449.6-201ENST00000612330 2296 ntBASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.07□□□□□ -0.16
HDHD3Q9BSH5 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 PRYP5-201ENST00000451909 266 ntBASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 MPDU1-223ENST00000582151 728 ntBASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 AL139424.1-201ENST00000607572 797 ntBASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 AL590326.2-201ENST00000625139 305 ntBASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 DBET-201ENST00000630918 3363 ntBASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HDHD3Q9BSH5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
HDHD3Q9BSH5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms