Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TMEM47Q9BQJ4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 AC098859.1-201ENST00000502915 1238 ntBASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 RARRES2P9-201ENST00000565168 469 ntBASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 AC093512.1-201ENST00000617969 520 ntBASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM47Q9BQJ4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 AC051619.7-201ENST00000568314 623 ntBASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 TUBB3P1-201ENST00000405796 1332 ntBASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM47Q9BQJ4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 CNN2P2-201ENST00000443536 909 ntBASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 FAM86GP-201ENST00000448322 971 ntBASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 CNN2P3-201ENST00000450201 906 ntBASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 MIR6080-201ENST00000617359 66 ntBASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 AL136317.3-201ENST00000618497 906 ntBASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 NKILA-202ENST00000614771 2598 ntBASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 LINC01144-201ENST00000626198 1710 ntBASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TMEM47Q9BQJ4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 FAM220BP-201ENST00000377689 816 ntBASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 SPDYE7P-202ENST00000420373 878 ntBASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 HMGN1P19-201ENST00000436976 333 ntBASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 DUX4L27-201ENST00000554796 1261 ntBASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 MIR4453-201ENST00000584019 89 ntBASIC19.19■□□□□ 0.66
TMEM47Q9BQJ4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms