Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
LITAFQ99732 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC11.07□□□□□ -0.64
LITAFQ99732 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 AC005912.2-201ENST00000619492 2400 ntBASIC11.07□□□□□ -0.64
LITAFQ99732 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC11.07□□□□□ -0.64
LITAFQ99732 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LITAFQ99732 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
LITAFQ99732 AC087481.3-201ENST00000602886 1894 ntBASIC11.06□□□□□ -0.64
LITAFQ99732 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC11.06□□□□□ -0.64
LITAFQ99732 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LITAFQ99732 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC11.06□□□□□ -0.64
LITAFQ99732 RASA4DP-201ENST00000460726 1199 ntBASIC11.06□□□□□ -0.64
LITAFQ99732 EGLN1P1-201ENST00000531623 762 ntBASIC11.06□□□□□ -0.64
LITAFQ99732 GCSHP2-201ENST00000560971 527 ntBASIC11.06□□□□□ -0.64
LITAFQ99732 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.06□□□□□ -0.64
LITAFQ99732 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 GPR32P1-201ENST00000601788 811 ntBASIC11.06□□□□□ -0.64
LITAFQ99732 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
LITAFQ99732 MMD2-204ENST00000612910 778 ntTSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 AL359736.2-201ENST00000621992 437 ntBASIC11.06□□□□□ -0.64
LITAFQ99732 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 FAM197Y4-202ENST00000622692 608 ntBASIC11.06□□□□□ -0.64
LITAFQ99732 TBCB-214ENST00000629269 413 ntTSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
LITAFQ99732 AC125634.1-201ENST00000438758 1403 ntBASIC11.06□□□□□ -0.64
LITAFQ99732 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.06□□□□□ -0.64
LITAFQ99732 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC11.06□□□□□ -0.64
LITAFQ99732 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
LITAFQ99732 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
LITAFQ99732 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.06□□□□□ -0.64
LITAFQ99732 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
LITAFQ99732 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
LITAFQ99732 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.05□□□□□ -0.64
LITAFQ99732 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
LITAFQ99732 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
LITAFQ99732 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms