Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.08■□□□□ 0.81
CRAMP1Q96RY5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CRAMP1Q96RY5 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 AC025048.3-201ENST00000590609 569 ntBASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 AC074044.1-201ENST00000609673 707 ntBASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 WFDC1-204ENST00000613603 549 ntBASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 AC005702.4-201ENST00000618393 416 ntBASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CRAMP1Q96RY5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 FO393414.2-201ENST00000405153 598 ntBASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 HIST3H2BA-201ENST00000436555 524 ntBASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CRAMP1Q96RY5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 AC007389.4-201ENST00000454674 793 ntBASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CRAMP1Q96RY5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms