Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 CRYGEP-201ENST00000412192 528 ntBASIC17.18■□□□□ 0.34
IFT43Q96FT9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 AC087163.2-201ENST00000457299 853 ntBASIC17.18■□□□□ 0.34
IFT43Q96FT9 AC112482.1-201ENST00000492080 688 ntBASIC17.18■□□□□ 0.34
IFT43Q96FT9 AP002490.2-201ENST00000524791 560 ntBASIC17.18■□□□□ 0.34
IFT43Q96FT9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 AC010327.4-202ENST00000591484 748 ntBASIC17.18■□□□□ 0.34
IFT43Q96FT9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFT43Q96FT9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
IFT43Q96FT9 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 AC106886.4-201ENST00000623557 2502 ntBASIC17.17■□□□□ 0.34
IFT43Q96FT9 AC002310.6-201ENST00000624451 1377 ntBASIC17.17■□□□□ 0.34
IFT43Q96FT9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.17■□□□□ 0.34
IFT43Q96FT9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 AC055717.3-201ENST00000622967 595 ntBASIC17.17■□□□□ 0.34
IFT43Q96FT9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
IFT43Q96FT9 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IFT43Q96FT9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 AC005052.1-201ENST00000625181 2492 ntBASIC17.16■□□□□ 0.34
IFT43Q96FT9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 KRT8P49-201ENST00000604166 1432 ntBASIC17.16■□□□□ 0.34
IFT43Q96FT9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 MCCD1P2-201ENST00000423228 335 ntBASIC17.16■□□□□ 0.34
IFT43Q96FT9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 VN2R19P-201ENST00000442399 1052 ntBASIC17.16■□□□□ 0.34
IFT43Q96FT9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.16■□□□□ 0.34
IFT43Q96FT9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IFT43Q96FT9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms