Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.79□□□□□ -0.04
RFT1Q96AA3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.79□□□□□ -0.04
RFT1Q96AA3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.79□□□□□ -0.04
RFT1Q96AA3 AL049597.2-201ENST00000565575 961 ntBASIC14.79□□□□□ -0.04
RFT1Q96AA3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.79□□□□□ -0.04
RFT1Q96AA3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.79□□□□□ -0.04
RFT1Q96AA3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFT1Q96AA3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RFT1Q96AA3 AL353593.2-201ENST00000602529 1483 ntBASIC14.79□□□□□ -0.04
RFT1Q96AA3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.79□□□□□ -0.04
RFT1Q96AA3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFT1Q96AA3 AC016734.2-201ENST00000624325 1377 ntBASIC14.79□□□□□ -0.04
RFT1Q96AA3 AL121956.5-201ENST00000625261 221 ntBASIC14.79□□□□□ -0.04
RFT1Q96AA3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RFT1Q96AA3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RFT1Q96AA3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RFT1Q96AA3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.78□□□□□ -0.04
RFT1Q96AA3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 AC132938.5-201ENST00000624980 1813 ntBASIC14.78□□□□□ -0.04
RFT1Q96AA3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 AC246785.2-201ENST00000432512 513 ntBASIC14.78□□□□□ -0.04
RFT1Q96AA3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFT1Q96AA3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFT1Q96AA3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.77□□□□□ -0.04
RFT1Q96AA3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.77□□□□□ -0.04
RFT1Q96AA3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
RFT1Q96AA3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.77□□□□□ -0.04
RFT1Q96AA3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RFT1Q96AA3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.77□□□□□ -0.04
RFT1Q96AA3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RFT1Q96AA3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 ME2P1-201ENST00000426028 1970 ntBASIC14.77□□□□□ -0.04
RFT1Q96AA3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.77□□□□□ -0.04
RFT1Q96AA3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFT1Q96AA3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFT1Q96AA3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.77□□□□□ -0.05
RFT1Q96AA3 MINOS1P3-201ENST00000457048 203 ntBASIC14.77□□□□□ -0.05
RFT1Q96AA3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.77□□□□□ -0.05
RFT1Q96AA3 AC096582.2-201ENST00000510860 516 ntBASIC14.77□□□□□ -0.05
RFT1Q96AA3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.77□□□□□ -0.05
RFT1Q96AA3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.77□□□□□ -0.05
RFT1Q96AA3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RFT1Q96AA3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFT1Q96AA3 AC073592.5-201ENST00000624854 528 ntBASIC14.77□□□□□ -0.05
RFT1Q96AA3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFT1Q96AA3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.77□□□□□ -0.05
RFT1Q96AA3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.77□□□□□ -0.05
RFT1Q96AA3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFT1Q96AA3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFT1Q96AA3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms