Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.17□□□□□ -0.14
GCN1Q92616 AL133267.1-201ENST00000398220 340 ntBASIC14.17□□□□□ -0.14
GCN1Q92616 HLA-DPA2-205ENST00000433582 733 ntBASIC14.17□□□□□ -0.14
GCN1Q92616 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.17□□□□□ -0.14
GCN1Q92616 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC14.17□□□□□ -0.14
GCN1Q92616 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.17□□□□□ -0.14
GCN1Q92616 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.17□□□□□ -0.14
GCN1Q92616 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.17□□□□□ -0.14
GCN1Q92616 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.17□□□□□ -0.14
GCN1Q92616 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.17□□□□□ -0.14
GCN1Q92616 AP000997.3-201ENST00000623333 2250 ntBASIC14.17□□□□□ -0.14
GCN1Q92616 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.17□□□□□ -0.14
GCN1Q92616 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.17□□□□□ -0.14
GCN1Q92616 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.17□□□□□ -0.14
GCN1Q92616 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GCN1Q92616 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
GCN1Q92616 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.17□□□□□ -0.14
GCN1Q92616 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.17□□□□□ -0.14
GCN1Q92616 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.17□□□□□ -0.14
GCN1Q92616 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.17□□□□□ -0.14
GCN1Q92616 C2orf69P1-201ENST00000563532 1093 ntBASIC14.17□□□□□ -0.14
GCN1Q92616 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.17□□□□□ -0.14
GCN1Q92616 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.17□□□□□ -0.14
GCN1Q92616 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GCN1Q92616 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.16□□□□□ -0.14
GCN1Q92616 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
GCN1Q92616 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
GCN1Q92616 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
GCN1Q92616 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.16□□□□□ -0.14
GCN1Q92616 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
GCN1Q92616 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.16□□□□□ -0.14
GCN1Q92616 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.16□□□□□ -0.14
GCN1Q92616 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.16□□□□□ -0.14
GCN1Q92616 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.16□□□□□ -0.14
GCN1Q92616 PIN4P1-201ENST00000451079 396 ntBASIC14.16□□□□□ -0.14
GCN1Q92616 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GCN1Q92616 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.16□□□□□ -0.14
GCN1Q92616 AL161670.2-201ENST00000557650 1227 ntBASIC14.16□□□□□ -0.14
GCN1Q92616 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.16□□□□□ -0.14
GCN1Q92616 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.16□□□□□ -0.14
GCN1Q92616 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.16□□□□□ -0.14
GCN1Q92616 AC004686.1-201ENST00000605113 538 ntBASIC14.16□□□□□ -0.14
GCN1Q92616 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.16□□□□□ -0.14
GCN1Q92616 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.16□□□□□ -0.14
GCN1Q92616 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.16□□□□□ -0.14
GCN1Q92616 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
GCN1Q92616 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 AC007787.1-201ENST00000588095 1583 ntBASIC14.16□□□□□ -0.14
GCN1Q92616 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.16□□□□□ -0.14
GCN1Q92616 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GCN1Q92616 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 AC012158.2-201ENST00000536546 354 ntBASIC14.16□□□□□ -0.14
GCN1Q92616 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GCN1Q92616 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.15□□□□□ -0.14
GCN1Q92616 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC14.15□□□□□ -0.14
GCN1Q92616 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCN1Q92616 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCN1Q92616 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.15□□□□□ -0.14
GCN1Q92616 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCN1Q92616 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.15□□□□□ -0.14
GCN1Q92616 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.15□□□□□ -0.14
GCN1Q92616 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
GCN1Q92616 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCN1Q92616 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
GCN1Q92616 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.15□□□□□ -0.14
GCN1Q92616 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.15□□□□□ -0.14
GCN1Q92616 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.15□□□□□ -0.14
GCN1Q92616 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
GCN1Q92616 SAMD11P1-201ENST00000571429 661 ntBASIC14.15□□□□□ -0.14
GCN1Q92616 AC007663.3-201ENST00000609632 465 ntBASIC14.15□□□□□ -0.14
GCN1Q92616 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.15□□□□□ -0.14
GCN1Q92616 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
GCN1Q92616 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCN1Q92616 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCN1Q92616 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCN1Q92616 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GCN1Q92616 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms