Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 AC007967.3-201ENST00000434308 558 ntBASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 AC009078.2-202ENST00000463353 338 ntBASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 STK25P1-201ENST00000585406 838 ntBASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 AC008608.2-201ENST00000606089 416 ntBASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RAB40AQ8WXH6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 AC126177.1-201ENST00000547829 2218 ntBASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 ABCD1P5-201ENST00000445663 754 ntBASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 AC106795.1-205ENST00000512851 1056 ntBASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 MTDHP3-201ENST00000594186 672 ntBASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAB40AQ8WXH6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 AL049757.1-201ENST00000616842 1596 ntBASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB40AQ8WXH6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms