Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.05■□□□□ -0
APH1BQ8WW43 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.05■□□□□ -0
APH1BQ8WW43 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.05■□□□□ -0
APH1BQ8WW43 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
APH1BQ8WW43 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.05■□□□□ -0
APH1BQ8WW43 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
APH1BQ8WW43 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
APH1BQ8WW43 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
APH1BQ8WW43 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.04■□□□□ -0
APH1BQ8WW43 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.04■□□□□ -0
APH1BQ8WW43 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
APH1BQ8WW43 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.04■□□□□ -0
APH1BQ8WW43 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 INTS4P1-201ENST00000438455 1935 ntBASIC15.04■□□□□ -0
APH1BQ8WW43 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.04■□□□□ -0
APH1BQ8WW43 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.04■□□□□ -0
APH1BQ8WW43 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.04■□□□□ -0
APH1BQ8WW43 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.04■□□□□ -0
APH1BQ8WW43 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 AC073508.3-201ENST00000619697 1419 ntBASIC15.04■□□□□ -0
APH1BQ8WW43 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.04■□□□□ -0
APH1BQ8WW43 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 TERF1P1-201ENST00000311003 1181 ntBASIC15.04■□□□□ -0
APH1BQ8WW43 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 AC087499.1-201ENST00000418141 1075 ntBASIC15.04■□□□□ -0
APH1BQ8WW43 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.04■□□□□ -0
APH1BQ8WW43 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.04■□□□□ -0
APH1BQ8WW43 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.04■□□□□ -0
APH1BQ8WW43 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.04■□□□□ -0
APH1BQ8WW43 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.04■□□□□ -0
APH1BQ8WW43 AC010654.1-201ENST00000615722 808 ntBASIC15.04■□□□□ -0
APH1BQ8WW43 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.04■□□□□ -0
APH1BQ8WW43 AP000867.4-201ENST00000641616 219 ntBASIC15.04■□□□□ -0
APH1BQ8WW43 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
APH1BQ8WW43 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
APH1BQ8WW43 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.04■□□□□ -0
APH1BQ8WW43 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
APH1BQ8WW43 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
APH1BQ8WW43 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
APH1BQ8WW43 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
APH1BQ8WW43 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.03■□□□□ -0
APH1BQ8WW43 RNF152P1-201ENST00000397754 604 ntBASIC15.03■□□□□ -0
APH1BQ8WW43 AC113347.1-201ENST00000413321 391 ntBASIC15.03■□□□□ -0
APH1BQ8WW43 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.03■□□□□ -0
APH1BQ8WW43 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.03■□□□□ -0
APH1BQ8WW43 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.03■□□□□ -0
APH1BQ8WW43 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 MPDU1-223ENST00000582151 728 ntBASIC15.03■□□□□ -0
APH1BQ8WW43 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.03■□□□□ -0
APH1BQ8WW43 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.03■□□□□ -0
APH1BQ8WW43 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
APH1BQ8WW43 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
APH1BQ8WW43 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.03■□□□□ -0
APH1BQ8WW43 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.03■□□□□ -0
APH1BQ8WW43 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APH1BQ8WW43 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APH1BQ8WW43 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APH1BQ8WW43 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.02■□□□□ -0
APH1BQ8WW43 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms