Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 AC136621.1-201ENST00000624017 2304 ntBASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SMIM4Q8WVI0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 AC020658.6-201ENST00000623564 1870 ntBASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 AC068587.6-202ENST00000641839 5619 ntBASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SMIM4Q8WVI0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 LINC01144-201ENST00000626198 1710 ntBASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 STARP1-201ENST00000397973 869 ntBASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 TSPY7P-201ENST00000431358 1114 ntBASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 AC092597.1-201ENST00000487352 616 ntBASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 AD001527.2-201ENST00000622994 785 ntBASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 PCGF3-213ENST00000620529 1899 ntBASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SMIM4Q8WVI0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms