Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 AC099063.4-201ENST00000641099 1602 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 AL512652.2-201ENST00000625156 1716 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 RBM17P3-201ENST00000417687 1192 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 FGFR3P6-201ENST00000457012 610 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 AC091167.2-201ENST00000579581 588 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 CLEC4GP1-201ENST00000596555 870 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 AC008608.2-201ENST00000606089 416 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 AL589182.2-201ENST00000619332 1049 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 AL355877.3-201ENST00000622820 899 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 AL139288.1-201ENST00000623748 933 ntBASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLDN22Q8N7P3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 GGT4P-201ENST00000623672 1708 ntBASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 REXO1L6P-202ENST00000619970 1078 ntBASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLDN22Q8N7P3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 AL031731.1-201ENST00000642131 2094 ntBASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN22Q8N7P3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms