Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAM1L1Q8N609 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 AC105233.2-201ENST00000523697 349 ntBASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 AF228730.5-201ENST00000530288 346 ntBASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 AL138918.1-201ENST00000568306 659 ntBASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 AL596442.2-201ENST00000610240 980 ntBASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 AC073439.1-201ENST00000624121 1774 ntBASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAM1L1Q8N609 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 AC069335.1-201ENST00000489972 472 ntBASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 AP001160.2-201ENST00000596071 487 ntBASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAM1L1Q8N609 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRAM1L1Q8N609 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms