Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 CRYGEP-201ENST00000412192 528 ntBASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 VN2R19P-201ENST00000442399 1052 ntBASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 AC009947.1-201ENST00000444350 727 ntBASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 AC009078.2-202ENST00000463353 338 ntBASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 RNA5SP415-201ENST00000517246 115 ntBASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 MIR4515-201ENST00000584082 81 ntBASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 AC012569.1-201ENST00000591191 1524 ntBASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TTC9CQ8N5M4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 AL512652.2-201ENST00000625156 1716 ntBASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 ACTL9-202ENST00000612068 1252 ntBASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 AL671710.1-201ENST00000610245 2349 ntBASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TTC9CQ8N5M4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 AC079776.4-201ENST00000511039 504 ntBASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.15□□□□□ -0.3
TTC9CQ8N5M4 AL645728.2-201ENST00000641974 660 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms