Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 AC092338.2-201ENST00000568827 1415 ntBASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 AC112698.1-201ENST00000510299 916 ntBASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 AC079781.5-202ENST00000641784 3743 ntBASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CROCCP3Q8IVE0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 AC041040.2-201ENST00000622926 2899 ntBASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 REXO1L2P-201ENST00000425429 2069 ntBASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 AC073648.6-201ENST00000641589 218 ntBASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 AC009090.5-201ENST00000624886 2285 ntBASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.1■□□□□ 0.01
CROCCP3Q8IVE0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TMBIM7P-203ENST00000641617 1718 ntBASIC15.09■□□□□ 0.01
CROCCP3Q8IVE0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms