Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 AC008735.5-201ENST00000623544 497 ntBASIC16.47■□□□□ 0.23
HPS6Q86YV9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 AC079781.4-201ENST00000641908 219 ntBASIC16.47■□□□□ 0.23
HPS6Q86YV9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HPS6Q86YV9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS6Q86YV9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 MIR940-201ENST00000401276 94 ntBASIC16.46■□□□□ 0.23
HPS6Q86YV9 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.46■□□□□ 0.23
HPS6Q86YV9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 PGAM5P1-201ENST00000518923 814 ntBASIC16.46■□□□□ 0.23
HPS6Q86YV9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 AC040169.1-201ENST00000565382 521 ntBASIC16.46■□□□□ 0.23
HPS6Q86YV9 Z83851.2-201ENST00000609564 659 ntBASIC16.46■□□□□ 0.23
HPS6Q86YV9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HPS6Q86YV9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HPS6Q86YV9 AC092384.3-202ENST00000564646 2873 ntBASIC16.46■□□□□ 0.23
HPS6Q86YV9 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
HPS6Q86YV9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS6Q86YV9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS6Q86YV9 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HPS6Q86YV9 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
HPS6Q86YV9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 AC104109.2-201ENST00000602919 1418 ntBASIC16.45■□□□□ 0.22
HPS6Q86YV9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 MIR3687-2-201ENST00000577708 61 ntBASIC16.45■□□□□ 0.22
HPS6Q86YV9 MIR3687-1-201ENST00000614492 61 ntBASIC16.45■□□□□ 0.22
HPS6Q86YV9 PGM5P2-202ENST00000637225 1043 ntBASIC16.45■□□□□ 0.22
HPS6Q86YV9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HPS6Q86YV9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 AC104640.1-201ENST00000562617 2109 ntBASIC16.45■□□□□ 0.22
HPS6Q86YV9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.45■□□□□ 0.22
HPS6Q86YV9 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms