Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 OR7E47P-204ENST00000575924 449 ntBASIC15.39■□□□□ 0.05
VRK2Q86Y07 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.39■□□□□ 0.05
VRK2Q86Y07 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VRK2Q86Y07 AL031008.1-201ENST00000619963 541 ntBASIC15.39■□□□□ 0.05
VRK2Q86Y07 AP001350.2-201ENST00000625104 1094 ntBASIC15.39■□□□□ 0.05
VRK2Q86Y07 PGM5P2-202ENST00000637225 1043 ntBASIC15.39■□□□□ 0.05
VRK2Q86Y07 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VRK2Q86Y07 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VRK2Q86Y07 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VRK2Q86Y07 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VRK2Q86Y07 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VRK2Q86Y07 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VRK2Q86Y07 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VRK2Q86Y07 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 GPAA1P2-202ENST00000606848 1787 ntBASIC15.39■□□□□ 0.05
VRK2Q86Y07 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.39■□□□□ 0.05
VRK2Q86Y07 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VRK2Q86Y07 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 RPS2P28-201ENST00000314255 741 ntBASIC15.38■□□□□ 0.05
VRK2Q86Y07 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 AC092910.1-201ENST00000482027 1129 ntBASIC15.38■□□□□ 0.05
VRK2Q86Y07 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 AL049840.3-201ENST00000602669 611 ntBASIC15.38■□□□□ 0.05
VRK2Q86Y07 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 AC117500.6-201ENST00000624871 588 ntBASIC15.38■□□□□ 0.05
VRK2Q86Y07 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
VRK2Q86Y07 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.38■□□□□ 0.05
VRK2Q86Y07 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.38■□□□□ 0.05
VRK2Q86Y07 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 PCGF3-213ENST00000620529 1899 ntBASIC15.37■□□□□ 0.05
VRK2Q86Y07 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 AC004870.1-201ENST00000315132 882 ntBASIC15.37■□□□□ 0.05
VRK2Q86Y07 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 HCG4-201ENST00000418983 998 ntBASIC15.37■□□□□ 0.05
VRK2Q86Y07 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms