Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.55■□□□□ 0.24
CYS1Q717R9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CYS1Q717R9 PMS2P4-201ENST00000412466 1052 ntBASIC16.55■□□□□ 0.24
CYS1Q717R9 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.55■□□□□ 0.24
CYS1Q717R9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.55■□□□□ 0.24
CYS1Q717R9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CYS1Q717R9 TP73-AS1-207ENST00000624167 988 ntBASIC16.55■□□□□ 0.24
CYS1Q717R9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.55■□□□□ 0.24
CYS1Q717R9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.55■□□□□ 0.24
CYS1Q717R9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CYS1Q717R9 AC132872.4-202ENST00000622924 2756 ntBASIC16.55■□□□□ 0.24
CYS1Q717R9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.55■□□□□ 0.24
CYS1Q717R9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CYS1Q717R9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CYS1Q717R9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CYS1Q717R9 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CYS1Q717R9 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.55■□□□□ 0.24
CYS1Q717R9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CYS1Q717R9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CYS1Q717R9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
CYS1Q717R9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.54■□□□□ 0.24
CYS1Q717R9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.54■□□□□ 0.24
CYS1Q717R9 AC126177.1-201ENST00000547829 2218 ntBASIC16.54■□□□□ 0.24
CYS1Q717R9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CYS1Q717R9 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.54■□□□□ 0.24
CYS1Q717R9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 AC016027.1-202ENST00000607927 1699 ntBASIC16.54■□□□□ 0.24
CYS1Q717R9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CYS1Q717R9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CYS1Q717R9 RPS2P1-201ENST00000434010 821 ntBASIC16.54■□□□□ 0.24
CYS1Q717R9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.54■□□□□ 0.24
CYS1Q717R9 RNPS1P1-201ENST00000507437 918 ntBASIC16.54■□□□□ 0.24
CYS1Q717R9 AL160237.2-201ENST00000556165 472 ntBASIC16.54■□□□□ 0.24
CYS1Q717R9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CYS1Q717R9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.54■□□□□ 0.24
CYS1Q717R9 PRELID1P1-202ENST00000567272 903 ntBASIC16.54■□□□□ 0.24
CYS1Q717R9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
CYS1Q717R9 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.54■□□□□ 0.24
CYS1Q717R9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.54■□□□□ 0.24
CYS1Q717R9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.54■□□□□ 0.24
CYS1Q717R9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.54■□□□□ 0.24
CYS1Q717R9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.54■□□□□ 0.24
CYS1Q717R9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CYS1Q717R9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CYS1Q717R9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.53■□□□□ 0.24
CYS1Q717R9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 MRPL20P1-201ENST00000400819 433 ntBASIC16.53■□□□□ 0.24
CYS1Q717R9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.53■□□□□ 0.24
CYS1Q717R9 AC073648.2-201ENST00000510116 352 ntBASIC16.53■□□□□ 0.24
CYS1Q717R9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
CYS1Q717R9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.53■□□□□ 0.24
CYS1Q717R9 AC105339.3-201ENST00000560043 636 ntBASIC16.53■□□□□ 0.24
CYS1Q717R9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.53■□□□□ 0.24
CYS1Q717R9 AL356488.2-201ENST00000602755 427 ntBASIC16.53■□□□□ 0.24
CYS1Q717R9 ACTL9-202ENST00000612068 1252 ntBASIC16.53■□□□□ 0.24
CYS1Q717R9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 MIR1199-201ENST00000621445 119 ntBASIC16.53■□□□□ 0.24
CYS1Q717R9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
CYS1Q717R9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.53■□□□□ 0.24
CYS1Q717R9 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CYS1Q717R9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CYS1Q717R9 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CYS1Q717R9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.53■□□□□ 0.24
CYS1Q717R9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CYS1Q717R9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms