Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 AC091304.2-201ENST00000564639 760 ntBASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM53Q6P2H8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 AL138688.1-201ENST00000624851 1594 ntBASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 AC026748.1-201ENST00000624349 3251 ntBASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 CLEC4GP1-201ENST00000596555 870 ntBASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 AL139327.4-201ENST00000612362 153 ntBASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 KRT8P10-201ENST00000450021 1447 ntBASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM53Q6P2H8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 AC003669.1-201ENST00000334569 611 ntBASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 KLF4P1-201ENST00000412782 1185 ntBASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 KRT18P31-201ENST00000506277 1292 ntBASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 STK19B-204ENST00000512515 211 ntBASIC15.31■□□□□ 0.04
TMEM53Q6P2H8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms