Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC096734.2-201ENST00000562054 433 ntBASIC19.85■□□□□ 0.77
RNF20Q5VTR2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 AC145285.3-201ENST00000564603 959 ntBASIC19.85■□□□□ 0.77
RNF20Q5VTR2 MIR3909-201ENST00000579518 119 ntBASIC19.85■□□□□ 0.77
RNF20Q5VTR2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.85■□□□□ 0.77
RNF20Q5VTR2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 AC092364.2-201ENST00000596710 2692 ntBASIC19.85■□□□□ 0.77
RNF20Q5VTR2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF20Q5VTR2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 RNU1-129P-201ENST00000384064 167 ntBASIC19.84■□□□□ 0.77
RNF20Q5VTR2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 U1.21-201ENST00000580816 167 ntBASIC19.84■□□□□ 0.77
RNF20Q5VTR2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 AC021097.1-201ENST00000607902 574 ntBASIC19.84■□□□□ 0.77
RNF20Q5VTR2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.84■□□□□ 0.77
RNF20Q5VTR2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF20Q5VTR2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 PMS2P4-201ENST00000412466 1052 ntBASIC19.83■□□□□ 0.77
RNF20Q5VTR2 RHOQP3-201ENST00000437982 621 ntBASIC19.83■□□□□ 0.77
RNF20Q5VTR2 POU5F1P6-201ENST00000466990 990 ntBASIC19.83■□□□□ 0.77
RNF20Q5VTR2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.83■□□□□ 0.77
RNF20Q5VTR2 AC010507.1-201ENST00000633895 436 ntBASIC19.83■□□□□ 0.77
RNF20Q5VTR2 AC007064.4-201ENST00000637740 555 ntBASIC19.83■□□□□ 0.77
RNF20Q5VTR2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RNF20Q5VTR2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF20Q5VTR2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF20Q5VTR2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF20Q5VTR2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RNF20Q5VTR2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RNF20Q5VTR2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF20Q5VTR2 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF20Q5VTR2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF20Q5VTR2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 AC018695.7-201ENST00000624587 2492 ntBASIC19.82■□□□□ 0.76
RNF20Q5VTR2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RNF20Q5VTR2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms