Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 UNC93B6-202ENST00000528242 690 ntBASIC17.23■□□□□ 0.35
LRRC38Q5VT99 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 AC116407.3-201ENST00000623905 1129 ntBASIC17.23■□□□□ 0.35
LRRC38Q5VT99 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.23■□□□□ 0.35
LRRC38Q5VT99 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 AC024909.3-201ENST00000611513 2257 ntBASIC17.22■□□□□ 0.35
LRRC38Q5VT99 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 HCG4B-203ENST00000450128 991 ntBASIC17.22■□□□□ 0.35
LRRC38Q5VT99 AL513480.1-201ENST00000451731 511 ntBASIC17.22■□□□□ 0.35
LRRC38Q5VT99 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC38Q5VT99 AC005622.1-201ENST00000636801 1703 ntBASIC17.21■□□□□ 0.35
LRRC38Q5VT99 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 AC093909.1-201ENST00000504731 1122 ntBASIC17.21■□□□□ 0.35
LRRC38Q5VT99 IGHV3-22-201ENST00000520721 359 ntBASIC17.21■□□□□ 0.35
LRRC38Q5VT99 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 AC096734.2-201ENST00000562054 433 ntBASIC17.21■□□□□ 0.35
LRRC38Q5VT99 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC38Q5VT99 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC38Q5VT99 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.34
LRRC38Q5VT99 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC38Q5VT99 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC38Q5VT99 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC38Q5VT99 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC38Q5VT99 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC38Q5VT99 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms