Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FAM78BQ5VT40 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.27□□□□□ -0.28
FAM78BQ5VT40 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
FAM78BQ5VT40 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FAM78BQ5VT40 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FAM78BQ5VT40 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
FAM78BQ5VT40 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
FAM78BQ5VT40 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
FAM78BQ5VT40 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 AL390719.2-201ENST00000606993 987 ntBASIC13.27□□□□□ -0.29
FAM78BQ5VT40 AC083849.1-201ENST00000615227 514 ntBASIC13.27□□□□□ -0.29
FAM78BQ5VT40 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 MTHFR-217ENST00000641820 1569 ntBASIC13.27□□□□□ -0.29
FAM78BQ5VT40 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 ME2P1-201ENST00000426028 1970 ntBASIC13.27□□□□□ -0.29
FAM78BQ5VT40 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
FAM78BQ5VT40 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 FAM220CP-201ENST00000395253 831 ntBASIC13.26□□□□□ -0.29
FAM78BQ5VT40 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 AL645929.1-201ENST00000420084 975 ntBASIC13.26□□□□□ -0.29
FAM78BQ5VT40 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.26□□□□□ -0.29
FAM78BQ5VT40 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
FAM78BQ5VT40 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms