Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 AC116407.4-201ENST00000623319 1061 ntBASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D4BQ5SQS7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 AC233702.3-201ENST00000578656 1387 ntBASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 AL020989.1-201ENST00000422979 469 ntBASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 MINOS1P3-201ENST00000457048 203 ntBASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 AC096582.2-201ENST00000510860 516 ntBASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.56■□□□□ 0.24
SH2D4BQ5SQS7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 AC016734.2-201ENST00000624325 1377 ntBASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 AL021920.2-201ENST00000624828 1351 ntBASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 KRT18P1-202ENST00000452408 1331 ntBASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 HLA-J-202ENST00000469281 1241 ntBASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 Z69720.1-201ENST00000601483 472 ntBASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 AP000550.4-202ENST00000639755 178 ntBASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D4BQ5SQS7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms