Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 AC004835.2-201ENST00000603762 682 ntBASIC14.55□□□□□ -0.08
FREM1Q5H8C1 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.55□□□□□ -0.08
FREM1Q5H8C1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 AC092580.3-201ENST00000430932 139 ntBASIC14.54□□□□□ -0.08
FREM1Q5H8C1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 HLA-J-202ENST00000469281 1241 ntBASIC14.54□□□□□ -0.08
FREM1Q5H8C1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 AC079781.4-201ENST00000641908 219 ntBASIC14.54□□□□□ -0.08
FREM1Q5H8C1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
FREM1Q5H8C1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 RN7SL589P-201ENST00000481268 310 ntBASIC14.53□□□□□ -0.08
FREM1Q5H8C1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 AC051619.7-201ENST00000568314 623 ntBASIC14.53□□□□□ -0.08
FREM1Q5H8C1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
FREM1Q5H8C1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms