Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
HIST1H1AQ02539 AC006449.5-201ENST00000610658 2098 ntBASIC12.81□□□□□ -0.36
HIST1H1AQ02539 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 SPDYE21P-201ENST00000413323 827 ntBASIC12.8□□□□□ -0.36
HIST1H1AQ02539 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 AL591684.3-201ENST00000605187 298 ntBASIC12.8□□□□□ -0.36
HIST1H1AQ02539 NPAP1P7-201ENST00000613027 823 ntBASIC12.8□□□□□ -0.36
HIST1H1AQ02539 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST1H1AQ02539 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 ABCD1P5-201ENST00000445663 754 ntBASIC12.79□□□□□ -0.36
HIST1H1AQ02539 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 MIR5100-201ENST00000579544 119 ntBASIC12.79□□□□□ -0.36
HIST1H1AQ02539 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 AL445228.2-201ENST00000605589 952 ntBASIC12.79□□□□□ -0.36
HIST1H1AQ02539 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 AP000867.4-201ENST00000641616 219 ntBASIC12.79□□□□□ -0.36
HIST1H1AQ02539 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.79□□□□□ -0.36
HIST1H1AQ02539 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms