Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
EFNB1P98172 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
EFNB1P98172 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.84□□□□□ -0.03
EFNB1P98172 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.84□□□□□ -0.03
EFNB1P98172 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.84□□□□□ -0.03
EFNB1P98172 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.84□□□□□ -0.03
EFNB1P98172 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.84□□□□□ -0.03
EFNB1P98172 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.84□□□□□ -0.03
EFNB1P98172 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.84□□□□□ -0.03
EFNB1P98172 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.84□□□□□ -0.03
EFNB1P98172 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.84□□□□□ -0.03
EFNB1P98172 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
EFNB1P98172 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.84□□□□□ -0.03
EFNB1P98172 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
EFNB1P98172 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
EFNB1P98172 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
EFNB1P98172 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
EFNB1P98172 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EFNB1P98172 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
EFNB1P98172 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EFNB1P98172 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.83□□□□□ -0.03
EFNB1P98172 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.83□□□□□ -0.03
EFNB1P98172 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
EFNB1P98172 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EFNB1P98172 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
EFNB1P98172 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.83□□□□□ -0.03
EFNB1P98172 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
EFNB1P98172 TNRC18P2-201ENST00000417666 2714 ntBASIC14.83□□□□□ -0.04
EFNB1P98172 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNB1P98172 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.83□□□□□ -0.04
EFNB1P98172 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNB1P98172 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.83□□□□□ -0.04
EFNB1P98172 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.83□□□□□ -0.04
EFNB1P98172 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.83□□□□□ -0.04
EFNB1P98172 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.83□□□□□ -0.04
EFNB1P98172 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNB1P98172 SSR4P1-203ENST00000599569 2260 ntBASIC14.83□□□□□ -0.04
EFNB1P98172 AC099063.4-201ENST00000641099 1602 ntBASIC14.83□□□□□ -0.04
EFNB1P98172 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EFNB1P98172 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.83□□□□□ -0.04
EFNB1P98172 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNB1P98172 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
EFNB1P98172 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNB1P98172 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.82□□□□□ -0.04
EFNB1P98172 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.82□□□□□ -0.04
EFNB1P98172 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNB1P98172 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.82□□□□□ -0.04
EFNB1P98172 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.82□□□□□ -0.04
EFNB1P98172 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
EFNB1P98172 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNB1P98172 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNB1P98172 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
EFNB1P98172 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
EFNB1P98172 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNB1P98172 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
EFNB1P98172 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.82□□□□□ -0.04
EFNB1P98172 HCG4-201ENST00000418983 998 ntBASIC14.82□□□□□ -0.04
EFNB1P98172 ATP5G2P1-201ENST00000433580 426 ntBASIC14.82□□□□□ -0.04
EFNB1P98172 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EFNB1P98172 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms