Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.81■□□□□ 0.44
SMAD3P84022 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.81■□□□□ 0.44
SMAD3P84022 GOLGA2P4-201ENST00000441462 777 ntBASIC17.81■□□□□ 0.44
SMAD3P84022 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.81■□□□□ 0.44
SMAD3P84022 AC099548.2-209ENST00000480264 625 ntBASIC17.81■□□□□ 0.44
SMAD3P84022 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.81■□□□□ 0.44
SMAD3P84022 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
SMAD3P84022 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.81■□□□□ 0.44
SMAD3P84022 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD3P84022 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.81■□□□□ 0.44
SMAD3P84022 AL033527.5-201ENST00000641382 801 ntBASIC17.81■□□□□ 0.44
SMAD3P84022 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMAD3P84022 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SMAD3P84022 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD3P84022 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SMAD3P84022 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.81■□□□□ 0.44
SMAD3P84022 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMAD3P84022 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SMAD3P84022 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.8■□□□□ 0.44
SMAD3P84022 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.8■□□□□ 0.44
SMAD3P84022 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.8■□□□□ 0.44
SMAD3P84022 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SMAD3P84022 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.8■□□□□ 0.44
SMAD3P84022 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SMAD3P84022 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.8■□□□□ 0.44
SMAD3P84022 AC098850.1-201ENST00000419919 790 ntBASIC17.8■□□□□ 0.44
SMAD3P84022 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 AC098859.1-201ENST00000502915 1238 ntBASIC17.8■□□□□ 0.44
SMAD3P84022 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.8■□□□□ 0.44
SMAD3P84022 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 SDHAP3-202ENST00000515467 728 ntBASIC17.8■□□□□ 0.44
SMAD3P84022 RNA5SP412-201ENST00000516234 123 ntBASIC17.8■□□□□ 0.44
SMAD3P84022 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.8■□□□□ 0.44
SMAD3P84022 MPDU1-223ENST00000582151 728 ntBASIC17.8■□□□□ 0.44
SMAD3P84022 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.8■□□□□ 0.44
SMAD3P84022 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.8■□□□□ 0.44
SMAD3P84022 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
SMAD3P84022 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.8■□□□□ 0.44
SMAD3P84022 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 OR6D1P-202ENST00000641007 5290 ntBASIC17.8■□□□□ 0.44
SMAD3P84022 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SMAD3P84022 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMAD3P84022 LINC00896-202ENST00000609602 2128 ntBASIC17.8■□□□□ 0.44
SMAD3P84022 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
SMAD3P84022 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD3P84022 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD3P84022 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SMAD3P84022 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SMAD3P84022 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SMAD3P84022 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD3P84022 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.79■□□□□ 0.44
SMAD3P84022 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD3P84022 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD3P84022 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SMAD3P84022 RRP7BP-205ENST00000566851 833 ntBASIC17.79■□□□□ 0.44
SMAD3P84022 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.79■□□□□ 0.44
SMAD3P84022 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD3P84022 AC004461.2-201ENST00000629517 803 ntBASIC17.79■□□□□ 0.44
SMAD3P84022 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD3P84022 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD3P84022 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD3P84022 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD3P84022 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SMAD3P84022 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.78■□□□□ 0.44
SMAD3P84022 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SMAD3P84022 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD3P84022 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.78■□□□□ 0.44
SMAD3P84022 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD3P84022 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD3P84022 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMAD3P84022 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD3P84022 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD3P84022 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SMAD3P84022 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD3P84022 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.78■□□□□ 0.44
SMAD3P84022 KLF2P4-201ENST00000451959 1225 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms