Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC17.4■□□□□ 0.38
CBX1P83916 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.4■□□□□ 0.38
CBX1P83916 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CBX1P83916 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CBX1P83916 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CBX1P83916 AL671710.1-201ENST00000610245 2349 ntBASIC17.39■□□□□ 0.38
CBX1P83916 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CBX1P83916 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
CBX1P83916 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBX1P83916 AC118758.2-201ENST00000614242 2813 ntBASIC17.39■□□□□ 0.38
CBX1P83916 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CBX1P83916 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.39■□□□□ 0.38
CBX1P83916 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX1P83916 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX1P83916 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 GALC-206ENST00000544807 2528 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX1P83916 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CBX1P83916 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.39■□□□□ 0.37
CBX1P83916 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.39■□□□□ 0.37
CBX1P83916 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.39■□□□□ 0.37
CBX1P83916 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CBX1P83916 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.39■□□□□ 0.37
CBX1P83916 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX1P83916 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC17.39■□□□□ 0.37
CBX1P83916 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX1P83916 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.39■□□□□ 0.37
CBX1P83916 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CBX1P83916 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CBX1P83916 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.38■□□□□ 0.37
CBX1P83916 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
CBX1P83916 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.38■□□□□ 0.37
CBX1P83916 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CBX1P83916 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 AC027612.1-201ENST00000445234 2395 ntBASIC17.38■□□□□ 0.37
CBX1P83916 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CBX1P83916 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CBX1P83916 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.38■□□□□ 0.37
CBX1P83916 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.38■□□□□ 0.37
CBX1P83916 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.38■□□□□ 0.37
CBX1P83916 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.38■□□□□ 0.37
CBX1P83916 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 AC105036.2-201ENST00000569468 176 ntBASIC17.38■□□□□ 0.37
CBX1P83916 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.38■□□□□ 0.37
CBX1P83916 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.38■□□□□ 0.37
CBX1P83916 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.38■□□□□ 0.37
CBX1P83916 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.38■□□□□ 0.37
CBX1P83916 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.38■□□□□ 0.37
CBX1P83916 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CBX1P83916 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.38■□□□□ 0.37
CBX1P83916 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CBX1P83916 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CBX1P83916 HAL-202ENST00000538703 2637 ntTSL 2 BASIC17.37■□□□□ 0.37
CBX1P83916 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBX1P83916 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.37■□□□□ 0.37
CBX1P83916 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBX1P83916 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CBX1P83916 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC17.37■□□□□ 0.37
CBX1P83916 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CBX1P83916 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CBX1P83916 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CBX1P83916 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CBX1P83916 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms