Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.78■□□□□ 0.28
WNT3AP56704 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 AL022342.1-201ENST00000400363 863 ntBASIC16.78■□□□□ 0.28
WNT3AP56704 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
WNT3AP56704 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.78■□□□□ 0.28
WNT3AP56704 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.78■□□□□ 0.28
WNT3AP56704 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
WNT3AP56704 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.78■□□□□ 0.28
WNT3AP56704 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 AL009183.1-201ENST00000603760 355 ntBASIC16.78■□□□□ 0.28
WNT3AP56704 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.78■□□□□ 0.28
WNT3AP56704 AC092865.6-201ENST00000642101 219 ntBASIC16.78■□□□□ 0.28
WNT3AP56704 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.78■□□□□ 0.28
WNT3AP56704 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
WNT3AP56704 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
WNT3AP56704 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
WNT3AP56704 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.77■□□□□ 0.28
WNT3AP56704 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
WNT3AP56704 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
WNT3AP56704 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
WNT3AP56704 LINC01144-201ENST00000626198 1710 ntBASIC16.77■□□□□ 0.28
WNT3AP56704 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.77■□□□□ 0.28
WNT3AP56704 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
WNT3AP56704 MIR940-201ENST00000401276 94 ntBASIC16.77■□□□□ 0.28
WNT3AP56704 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
WNT3AP56704 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.77■□□□□ 0.28
WNT3AP56704 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.77■□□□□ 0.28
WNT3AP56704 AC140658.5-201ENST00000438532 169 ntBASIC16.77■□□□□ 0.28
WNT3AP56704 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
WNT3AP56704 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
WNT3AP56704 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
WNT3AP56704 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
WNT3AP56704 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.77■□□□□ 0.28
WNT3AP56704 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.77■□□□□ 0.28
WNT3AP56704 AC109635.5-201ENST00000533593 962 ntBASIC16.77■□□□□ 0.28
WNT3AP56704 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.77■□□□□ 0.28
WNT3AP56704 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.77■□□□□ 0.28
WNT3AP56704 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
WNT3AP56704 PDPK2P-202ENST00000562415 1191 ntBASIC16.77■□□□□ 0.28
WNT3AP56704 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.77■□□□□ 0.28
WNT3AP56704 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
WNT3AP56704 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
WNT3AP56704 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.77■□□□□ 0.27
WNT3AP56704 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.77■□□□□ 0.27
WNT3AP56704 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.27
WNT3AP56704 AC092919.2-201ENST00000623631 1645 ntBASIC16.77■□□□□ 0.27
WNT3AP56704 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
WNT3AP56704 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
WNT3AP56704 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.77■□□□□ 0.27
WNT3AP56704 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.77■□□□□ 0.27
WNT3AP56704 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.77■□□□□ 0.27
WNT3AP56704 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
WNT3AP56704 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.76■□□□□ 0.27
WNT3AP56704 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.76■□□□□ 0.27
WNT3AP56704 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.76■□□□□ 0.27
WNT3AP56704 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
WNT3AP56704 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
WNT3AP56704 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
WNT3AP56704 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.76■□□□□ 0.27
WNT3AP56704 AC074386.1-202ENST00000463561 864 ntBASIC16.76■□□□□ 0.27
WNT3AP56704 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.76■□□□□ 0.27
WNT3AP56704 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.76■□□□□ 0.27
WNT3AP56704 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
WNT3AP56704 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.76■□□□□ 0.27
WNT3AP56704 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.76■□□□□ 0.27
WNT3AP56704 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.76■□□□□ 0.27
WNT3AP56704 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
WNT3AP56704 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
WNT3AP56704 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms