Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL596087.1-201ENST00000400979 1969 ntBASIC16.3■□□□□ 0.2
CDH13P55290 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CDH13P55290 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH13P55290 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH13P55290 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH13P55290 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.3■□□□□ 0.2
CDH13P55290 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.3■□□□□ 0.2
CDH13P55290 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH13P55290 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.3■□□□□ 0.2
CDH13P55290 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH13P55290 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH13P55290 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CDH13P55290 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH13P55290 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDH13P55290 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDH13P55290 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDH13P55290 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDH13P55290 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDH13P55290 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH13P55290 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH13P55290 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CDH13P55290 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CDH13P55290 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CDH13P55290 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.29■□□□□ 0.2
CDH13P55290 SAPCD2P3-201ENST00000455031 850 ntBASIC16.29■□□□□ 0.2
CDH13P55290 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH13P55290 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH13P55290 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH13P55290 AL805961.1-202ENST00000641562 540 ntBASIC16.29■□□□□ 0.2
CDH13P55290 AC022188.1-201ENST00000620960 1664 ntBASIC16.29■□□□□ 0.2
CDH13P55290 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH13P55290 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH13P55290 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH13P55290 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.29■□□□□ 0.2
CDH13P55290 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDH13P55290 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH13P55290 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.29■□□□□ 0.2
CDH13P55290 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDH13P55290 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CDH13P55290 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CDH13P55290 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 AL365203.3-201ENST00000609742 2057 ntBASIC16.28■□□□□ 0.2
CDH13P55290 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH13P55290 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH13P55290 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.28■□□□□ 0.2
CDH13P55290 NFIC-211ENST00000641145 8399 ntBASIC16.28■□□□□ 0.2
CDH13P55290 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH13P55290 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDH13P55290 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH13P55290 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDH13P55290 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH13P55290 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.28■□□□□ 0.2
CDH13P55290 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.28■□□□□ 0.2
CDH13P55290 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms