Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH4P55283 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH4P55283 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH4P55283 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 AP000842.3-202ENST00000569238 1080 ntBASIC16.95■□□□□ 0.3
CDH4P55283 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.95■□□□□ 0.3
CDH4P55283 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH4P55283 AC009093.7-201ENST00000623853 1223 ntBASIC16.95■□□□□ 0.3
CDH4P55283 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.95■□□□□ 0.3
CDH4P55283 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CDH4P55283 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH4P55283 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH4P55283 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH4P55283 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CDH4P55283 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CDH4P55283 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH4P55283 LINC01144-201ENST00000626198 1710 ntBASIC16.94■□□□□ 0.3
CDH4P55283 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH4P55283 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.94■□□□□ 0.3
CDH4P55283 KRT18P32-201ENST00000424695 1287 ntBASIC16.94■□□□□ 0.3
CDH4P55283 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH4P55283 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH4P55283 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH4P55283 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH4P55283 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH4P55283 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH4P55283 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH4P55283 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH4P55283 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH4P55283 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH4P55283 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH4P55283 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH4P55283 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH4P55283 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH4P55283 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.93■□□□□ 0.3
CDH4P55283 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH4P55283 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH4P55283 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH4P55283 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH4P55283 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH4P55283 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH4P55283 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDH4P55283 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDH4P55283 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.93■□□□□ 0.3
CDH4P55283 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH4P55283 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
CDH4P55283 AC011676.5-201ENST00000624864 2660 ntBASIC16.93■□□□□ 0.3
CDH4P55283 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH4P55283 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CDH4P55283 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDH4P55283 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH4P55283 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH4P55283 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH4P55283 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms