Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA2D1P54289 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CACNA2D1P54289 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 AL139400.1-201ENST00000366220 510 ntBASIC17.61■□□□□ 0.41
CACNA2D1P54289 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 SPCS2P4-201ENST00000436160 681 ntBASIC17.61■□□□□ 0.41
CACNA2D1P54289 SPDYE11-202ENST00000450699 704 ntBASIC17.61■□□□□ 0.41
CACNA2D1P54289 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 SPDYE9P-201ENST00000570642 692 ntBASIC17.61■□□□□ 0.41
CACNA2D1P54289 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 SPDYE10P-202ENST00000612005 668 ntBASIC17.61■□□□□ 0.41
CACNA2D1P54289 SPDYE8P-202ENST00000612377 668 ntBASIC17.61■□□□□ 0.41
CACNA2D1P54289 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.61■□□□□ 0.41
CACNA2D1P54289 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CACNA2D1P54289 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA2D1P54289 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 AL161645.1-201ENST00000622716 1255 ntBASIC17.6■□□□□ 0.41
CACNA2D1P54289 KRT18P28-201ENST00000453838 1332 ntBASIC17.6■□□□□ 0.41
CACNA2D1P54289 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CACNA2D1P54289 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.6■□□□□ 0.41
CACNA2D1P54289 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
CACNA2D1P54289 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CACNA2D1P54289 AL512652.2-201ENST00000625156 1716 ntBASIC17.59■□□□□ 0.41
CACNA2D1P54289 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms