Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
NUP98P52948 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
NUP98P52948 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.37■□□□□ 0.85
NUP98P52948 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.37■□□□□ 0.85
NUP98P52948 TTTY23B-201ENST00000442790 549 ntBASIC20.37■□□□□ 0.85
NUP98P52948 ELK1P1-201ENST00000485699 580 ntBASIC20.37■□□□□ 0.85
NUP98P52948 CTBP2P3-201ENST00000585629 1255 ntBASIC20.37■□□□□ 0.85
NUP98P52948 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.36■□□□□ 0.85
NUP98P52948 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
NUP98P52948 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
NUP98P52948 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.36■□□□□ 0.85
NUP98P52948 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.36■□□□□ 0.85
NUP98P52948 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NUP98P52948 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.36■□□□□ 0.85
NUP98P52948 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.36■□□□□ 0.85
NUP98P52948 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 AC123567.1-201ENST00000548294 1261 ntBASIC20.36■□□□□ 0.85
NUP98P52948 RRP7BP-205ENST00000566851 833 ntBASIC20.36■□□□□ 0.85
NUP98P52948 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC20.36■□□□□ 0.85
NUP98P52948 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.36■□□□□ 0.85
NUP98P52948 CLK3P2-201ENST00000427566 1453 ntBASIC20.36■□□□□ 0.85
NUP98P52948 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.36■□□□□ 0.85
NUP98P52948 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NUP98P52948 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.35■□□□□ 0.85
NUP98P52948 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUP98P52948 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP98P52948 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NUP98P52948 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP98P52948 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.35■□□□□ 0.85
NUP98P52948 AC098614.1-201ENST00000368528 745 ntBASIC20.35■□□□□ 0.85
NUP98P52948 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC20.35■□□□□ 0.85
NUP98P52948 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.35■□□□□ 0.85
NUP98P52948 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC20.35■□□□□ 0.85
NUP98P52948 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.35■□□□□ 0.85
NUP98P52948 PCDHB18P-201ENST00000524813 2368 ntBASIC20.35■□□□□ 0.85
NUP98P52948 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
NUP98P52948 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NUP98P52948 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.35■□□□□ 0.85
NUP98P52948 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
NUP98P52948 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
NUP98P52948 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
NUP98P52948 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.35■□□□□ 0.85
NUP98P52948 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NUP98P52948 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.34■□□□□ 0.85
NUP98P52948 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC20.34■□□□□ 0.85
NUP98P52948 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.34■□□□□ 0.85
NUP98P52948 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.34■□□□□ 0.85
NUP98P52948 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.34■□□□□ 0.85
NUP98P52948 AC074044.1-201ENST00000609673 707 ntBASIC20.34■□□□□ 0.85
NUP98P52948 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP98P52948 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP98P52948 Z97205.2-201ENST00000564697 1639 ntBASIC20.34■□□□□ 0.85
NUP98P52948 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP98P52948 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NUP98P52948 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP98P52948 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.34■□□□□ 0.85
NUP98P52948 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.34■□□□□ 0.85
NUP98P52948 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP98P52948 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NUP98P52948 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP98P52948 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP98P52948 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.34■□□□□ 0.85
NUP98P52948 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP98P52948 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NUP98P52948 AC112492.5-201ENST00000421897 457 ntBASIC20.34■□□□□ 0.85
NUP98P52948 HLA-V-201ENST00000429037 534 ntBASIC20.34■□□□□ 0.85
NUP98P52948 AC007389.4-201ENST00000454674 793 ntBASIC20.34■□□□□ 0.85
NUP98P52948 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.34■□□□□ 0.85
NUP98P52948 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC20.34■□□□□ 0.85
NUP98P52948 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NUP98P52948 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUP98P52948 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUP98P52948 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUP98P52948 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NUP98P52948 UBALD1-205ENST00000590891 2641 ntBASIC20.33■□□□□ 0.85
NUP98P52948 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUP98P52948 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUP98P52948 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUP98P52948 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NUP98P52948 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUP98P52948 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC20.33■□□□□ 0.85
NUP98P52948 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NUP98P52948 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC20.33■□□□□ 0.85
NUP98P52948 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NUP98P52948 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NUP98P52948 SDHAP3-202ENST00000515467 728 ntBASIC20.33■□□□□ 0.85
NUP98P52948 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.33■□□□□ 0.85
NUP98P52948 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC20.33■□□□□ 0.85
NUP98P52948 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.33■□□□□ 0.85
NUP98P52948 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms