Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 AC067863.1-201ENST00000494933 530 ntBASIC15.21■□□□□ 0.03
SSR4P51571 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
SSR4P51571 AL512356.2-201ENST00000546955 174 ntBASIC15.21■□□□□ 0.03
SSR4P51571 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.21■□□□□ 0.03
SSR4P51571 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.21■□□□□ 0.03
SSR4P51571 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.21■□□□□ 0.03
SSR4P51571 AC073389.1-201ENST00000595595 795 ntBASIC15.21■□□□□ 0.03
SSR4P51571 AL355385.1-201ENST00000606123 409 ntBASIC15.21■□□□□ 0.03
SSR4P51571 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SSR4P51571 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.21■□□□□ 0.03
SSR4P51571 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR4P51571 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR4P51571 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR4P51571 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR4P51571 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.21■□□□□ 0.03
SSR4P51571 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SSR4P51571 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SSR4P51571 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SSR4P51571 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SSR4P51571 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSR4P51571 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSR4P51571 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SSR4P51571 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSR4P51571 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
SSR4P51571 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SSR4P51571 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 AC012313.1-201ENST00000593393 3059 ntBASIC15.2■□□□□ 0.02
SSR4P51571 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR4P51571 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SSR4P51571 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SSR4P51571 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.2■□□□□ 0.02
SSR4P51571 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 SPDYE7P-202ENST00000420373 878 ntBASIC15.2■□□□□ 0.02
SSR4P51571 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.2■□□□□ 0.02
SSR4P51571 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.2■□□□□ 0.02
SSR4P51571 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR4P51571 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR4P51571 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 ALG1L8P-201ENST00000533887 760 ntBASIC15.2■□□□□ 0.02
SSR4P51571 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.2■□□□□ 0.02
SSR4P51571 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 Z92544.3-201ENST00000624747 417 ntBASIC15.2■□□□□ 0.02
SSR4P51571 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR4P51571 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.2■□□□□ 0.02
SSR4P51571 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SSR4P51571 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.2■□□□□ 0.02
SSR4P51571 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SSR4P51571 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SSR4P51571 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.19■□□□□ 0.02
SSR4P51571 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 GPAA1P2-202ENST00000606848 1787 ntBASIC15.19■□□□□ 0.02
SSR4P51571 AC073439.1-201ENST00000624121 1774 ntBASIC15.19■□□□□ 0.02
SSR4P51571 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.19■□□□□ 0.02
SSR4P51571 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SSR4P51571 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.19■□□□□ 0.02
SSR4P51571 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SSR4P51571 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms